EnhancerDB
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  3. rs143621726[chr15:39420442]
Enhancers that have rs143621726[chr15:39420442]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39405340 39429015 enh31301
Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143621726[chr15:39420442]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39420016 39421186 P63 GTRD no Skin (Keratinocyte) 21647955
chr15 39420016 39421186 P63 GTRD no Skin (Keratinocyte) 108132328
chr15 39420248 39420898 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21647961
chr15 39420342 39420712 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21647962
chr15 39420377 39421185 P63 GTRD no Skin (Keratinocyte) 21647963
chr15 39420377 39421185 P63 GTRD no Skin (Keratinocyte) 108132329
chr15 39420399 39420759 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21647964
chr15 39420432 39420772 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21647965
chr15 39420434 39420770 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21647966
chr15 39420436 39420447 USF1 JASPAR yes 22855671
chr15 39420436 39420448 PKNOX2 JASPAR yes 22855672
chr15 39420437 39420447 TFEB JASPAR yes 22855673
chr15 39420437 39420447 TFEC JASPAR yes 22855674
chr15 39420437 39420448 USF2 JASPAR yes 22855675
Genes associated with rs143621726[chr15:39420442], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More