EnhancerDB
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  3. rs143658279[chr12:52519730]
Enhancers that have rs143658279[chr12:52519730]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs143658279[chr12:52519730]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52518275 52519891 AR GTRD no Prostate (PC-3) 21546230
chr12 52519065 52523398 P63 GTRD no Skin (Keratinocyte) 21546231
chr12 52519499 52523414 P63 GTRD no Skin (Keratinocyte) 21546243
chr12 52519705 52520959 ZNF143 GTRD no Epithelial (MCF-7) 21546244
chr12 52519723 52519734 STAT1 JASPAR yes 120919502
chr12 52519723 52519734 STAT3 JASPAR yes 120919503
chr12 52519726 52519733 ETS1 TRANSFAC yes 120919504
chr12 52519726 52519736 GABPA JASPAR yes 120919505
Genes associated with rs143658279[chr12:52519730], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More