EnhancerDB
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  3. rs143677920[chr3:124549853]
Enhancers that have rs143677920[chr3:124549853]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143677920[chr3:124549853]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124549835 124549855 RREB1 JASPAR yes 5404837
chr3 124549838 124549858 RREB1 JASPAR yes 5404838
chr3 124549841 124549861 RREB1 JASPAR yes 5404839
chr3 124549850 124549865 FOXP1 JASPAR yes 5404840
chr3 124549853 124549864 FOXP2 JASPAR yes 5404841
Genes associated with rs143677920[chr3:124549853], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More