EnhancerDB
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  3. rs143687740[chr1:39654464]
Enhancers that have rs143687740[chr1:39654464]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39647111 39665522 enh11761
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143687740[chr1:39654464]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39654458 39654468 SP1 JASPAR yes 28264675
chr1 39654459 39654469 SP1 JASPAR yes 28264676
chr1 39654460 39654465 SP1 TRANSFAC yes 28264677
chr1 39654461 39654466 SP1 TRANSFAC yes 28264678
chr1 39654461 39654467 SP1 TRANSFAC yes 28264679
chr1 39654463 39654476 NFKB1 JASPAR yes 28264680
chr1 39654463 39654476 NFKB2 JASPAR yes 28264681
Genes associated with rs143687740[chr1:39654464], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More