EnhancerDB
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  3. rs143830771[chr1:39603903]
Enhancers that have rs143830771[chr1:39603903]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39588469 39628695 enh11759
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143830771[chr1:39603903]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39603884 39603904 RREB1 JASPAR yes 28256760
chr1 39603887 39603908 IRF1 JASPAR yes 28256763
chr1 39603889 39603909 RREB1 JASPAR yes 28256764
chr1 39603892 39603904 IRF1 JASPAR yes 28256765
chr1 39603892 39603907 FOXP1 JASPAR yes 28256766
chr1 39603893 39603914 IRF1 JASPAR yes 28256767
chr1 39603895 39603909 IRF7 JASPAR yes 28256768
chr1 39603898 39603919 IRF1 JASPAR yes 28256769
Genes associated with rs143830771[chr1:39603903], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More