EnhancerDB
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  3. rs143842002[chr5:77811179]
Enhancers that have rs143842002[chr5:77811179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs143842002[chr5:77811179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77811172 77811186 ONECUT2 JASPAR yes 63595173
chr5 77811178 77811183 H4TF1 TRANSFAC yes 63595174
chr5 77811179 77811187 FEV JASPAR yes 63595175
chr5 77811179 77811192 JUN JASPAR yes 63595176
Genes associated with rs143842002[chr5:77811179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More