EnhancerDB
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  3. rs143849659[chr15:42220814]
Enhancers that have rs143849659[chr15:42220814]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42202285 42235244 enh3549
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143849659[chr15:42220814]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42220743 42221201 TCF7L2 GTRD no Colon (HCT116) 21651278
chr15 42220743 42221201 TCF7L2 GTRD no Colon (HCT116) 108135208
chr15 42220764 42221292 TCF7L2 GTRD no Colon (HCT116) 21651279
chr15 42220764 42221292 TCF7L2 GTRD no Colon (HCT116) 108135209
chr15 42220809 42220824 NFYB JASPAR yes 23006308
Genes associated with rs143849659[chr15:42220814], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More