EnhancerDB
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  3. rs143859408[chr6:47209420]
Enhancers that have rs143859408[chr6:47209420]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47202205 47219001 enh9147
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs143859408[chr6:47209420]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47209406 47209422 POU4F2 JASPAR yes 102014114
chr6 47209409 47209420 CDX2 JASPAR yes 102014115
chr6 47209412 47209424 FOXI1 JASPAR yes 102014116
Genes associated with rs143859408[chr6:47209420], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More