EnhancerDB
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  3. rs143873882[chr6:30768196]
Enhancers that have rs143873882[chr6:30768196]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143873882[chr6:30768196]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30768177 30768197 RREB1 JASPAR yes 101051872
chr6 30768178 30768199 IRF1 JASPAR yes 101051873
chr6 30768179 30768199 RREB1 JASPAR yes 101051876
chr6 30768184 30768199 FOXP1 JASPAR yes 101051880
chr6 30768184 30768204 RREB1 JASPAR yes 101051881
chr6 30768184 30768205 IRF1 JASPAR yes 101051882
chr6 30768191 30768197 TCF4 TRANSFAC yes 101051883
chr6 30768191 30768206 FOXP1 JASPAR yes 101051884
chr6 30768192 30768203 FOXP2 JASPAR yes 101051885
Genes associated with rs143873882[chr6:30768196], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More