EnhancerDB
  1. Home
  2. SNP
  3. rs143912841[chr12:125215341]
Enhancers that have rs143912841[chr12:125215341]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143912841[chr12:125215341]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125214939 125215535 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21582419
chr12 125214983 125215527 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582420
chr12 125214997 125215537 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582421
chr12 125215018 125215514 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21582422
chr12 125215041 125215611 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21582423
chr12 125215094 125215534 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582424
chr12 125215115 125215405 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582425
chr12 125215119 125215451 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582426
chr12 125215139 125215479 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21582427
chr12 125215332 125215347 NR2C2 JASPAR yes 124414784
chr12 125215333 125215347 RXRB JASPAR yes 124414785
chr12 125215333 125215347 RXRG JASPAR yes 124414786
chr12 125215336 125215356 ESR1 JASPAR yes 124414787
chr12 125215339 125215352 SMAD2 JASPAR yes 124414788
chr12 125215340 125215358 ESR2 JASPAR yes 124414789
chr12 125215340 125215358 RARA JASPAR yes 124414790
chr12 125215341 125215356 ESR2 JASPAR yes 124414791
chr12 125215341 125215361 ESR1 JASPAR yes 124414792
Genes associated with rs143912841[chr12:125215341], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More