EnhancerDB
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  3. rs143926090[chr17:28054231]
Enhancers that have rs143926090[chr17:28054231]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
chr17 28053660 28054255 vista24359
VISTA
Transcript factors that have rs143926090[chr17:28054231]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28051687 28054658 ZNF274 GTRD no Bone Marrow (K562) 21749607
chr17 28051687 28054658 ZNF274 GTRD no Bone Marrow (K562) 108248081
chr17 28052504 28054327 ZNF274 GTRD no Blood (GM12878) 21749608
chr17 28052504 28054327 ZNF274 GTRD no Blood (GM12878) 108248082
chr17 28053738 28054278 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108248103
chr17 28053756 28054306 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749620
chr17 28053756 28054306 GATA2 UCSC Txn Factor no Conserved 108248105
chr17 28053756 28054306 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248106
chr17 28053814 28054330 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749621
chr17 28053814 28054330 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248107
chr17 28053843 28054259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749623
chr17 28053843 28054259 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248109
chr17 28053849 28054249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749624
chr17 28053849 28054249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248110
chr17 28053851 28054441 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749625
chr17 28053851 28054441 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248111
chr17 28053862 28054318 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749626
chr17 28053862 28054318 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248112
chr17 28053890 28054346 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749628
chr17 28053890 28054346 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248114
chr17 28053899 28054235 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749629
chr17 28053899 28054235 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248115
chr17 28053907 28054503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749631
chr17 28053907 28054503 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248117
chr17 28053909 28054505 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749632
chr17 28053909 28054505 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248118
chr17 28053912 28054356 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21749633
chr17 28053912 28054356 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108248119
chr17 28053955 28054231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749637
chr17 28053955 28054231 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248125
chr17 28053967 28054347 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749639
chr17 28053967 28054347 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248127
chr17 28053974 28054250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21749642
chr17 28053974 28054250 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108248131
chr17 28053977 28054233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21749643
chr17 28053977 28054233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108248132
chr17 28054224 28054238 ONECUT3 JASPAR yes 21216596
chr17 28054224 28054238 ONECUT3 JASPAR yes 53754208
chr17 28054227 28054242 MEF2C JASPAR yes 21216597
chr17 28054227 28054242 MEF2C JASPAR yes 53754209
chr17 28054228 28054243 MEF2A JASPAR yes 21216598
chr17 28054228 28054243 MEF2A JASPAR yes 53754210
chr17 28054229 28054241 MEF2A JASPAR yes 21216599
chr17 28054229 28054241 MEF2B JASPAR yes 21216600
chr17 28054229 28054241 MEF2D JASPAR yes 21216601
chr17 28054229 28054241 MEF2A JASPAR yes 53754211
chr17 28054229 28054241 MEF2B JASPAR yes 53754212
chr17 28054229 28054241 MEF2D JASPAR yes 53754213
chr17 28054230 28054234 H1TF2 TRANSFAC yes 21216602
chr17 28054230 28054234 NFE TRANSFAC yes 21216603
chr17 28054230 28054234 SRF TRANSFAC yes 21216604
chr17 28054230 28054234 H1TF2 TRANSFAC yes 53754214
chr17 28054230 28054234 NFE TRANSFAC yes 53754215
chr17 28054230 28054234 SRF TRANSFAC yes 53754216
chr17 28054230 28054240 MEF2A JASPAR yes 21216605
chr17 28054230 28054240 MEF2A JASPAR yes 53754217
Genes associated with rs143926090[chr17:28054231], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More