EnhancerDB
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  3. rs143928930[chr11:62266857]
Enhancers that have rs143928930[chr11:62266857]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 62262575 62280595 enh13974
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143928930[chr11:62266857]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 62266437 62267092 TCF7L2 GTRD no Colon (HCT116) 107974483
chr11 62266853 62266868 MEF2C JASPAR yes 39209233
chr11 62266854 62266869 MEF2A JASPAR yes 39209234
chr11 62266855 62266867 MEF2A JASPAR yes 39209235
chr11 62266855 62266867 MEF2B JASPAR yes 39209236
chr11 62266855 62266867 MEF2D JASPAR yes 39209237
Genes associated with rs143928930[chr11:62266857], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More