EnhancerDB
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  3. rs143968905[chr17:42181433]
Enhancers that have rs143968905[chr17:42181433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143968905[chr17:42181433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42181422 42181434 PKNOX1 JASPAR yes 54387641
chr17 42181422 42181434 TGIF1 JASPAR yes 54387642
chr17 42181422 42181435 ZBTB18 JASPAR yes 54387643
chr17 42181423 42181433 FIGLA JASPAR yes 54387644
chr17 42181423 42181433 ID4 JASPAR yes 54387645
chr17 42181423 42181433 TCF3 JASPAR yes 54387646
chr17 42181423 42181433 TCF4 JASPAR yes 54387647
chr17 42181424 42181433 SNAI2 JASPAR yes 54387648
Genes associated with rs143968905[chr17:42181433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More