EnhancerDB
  1. Home
  2. SNP
  3. rs143978355[chr2:240188788]
Enhancers that have rs143978355[chr2:240188788]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs143978355[chr2:240188788]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240188782 240188796 GLIS2 JASPAR yes 82223525
chr2 240188782 240188796 GLIS3 JASPAR yes 82223526
chr2 240188786 240188796 ZNF740 JASPAR yes 82223527
Genes associated with rs143978355[chr2:240188788], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More