EnhancerDB
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  3. rs143988469[chr5:14143045]
Enhancers that have rs143988469[chr5:14143045]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14142745 14193315 enh22052
Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr5 14142803 14143164 vista47089
VISTA
Transcript factors that have rs143988469[chr5:14143045]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14142866 14143300 CTCF UCSC Txn Factor no Conserved 108534419
chr5 14142869 14145893 POLR2A UCSC Txn Factor no Conserved 108534420
chr5 14143037 14143050 TFAP2A JASPAR yes 61014154
chr5 14143037 14143050 TFAP2B JASPAR yes 61014155
chr5 14143037 14143050 TFAP2C JASPAR yes 61014156
chr5 14143037 14143050 TFAP2A JASPAR yes 70621138
chr5 14143037 14143050 TFAP2B JASPAR yes 70621139
chr5 14143037 14143050 TFAP2C JASPAR yes 70621140
chr5 14143045 14143055 SMAD3 JASPAR yes 61014157
chr5 14143045 14143055 SMAD3 JASPAR yes 70621141
Genes associated with rs143988469[chr5:14143045], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More