EnhancerDB
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  3. rs144020546[chr10:21641997]
Enhancers that have rs144020546[chr10:21641997]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 21636765 21666075 enh13040
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs144020546[chr10:21641997]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 21641989 21642004 HNF1A JASPAR yes 125900243
chr10 21641990 21642003 HNF1B JASPAR yes 125900244
chr10 21641991 21642003 HNF1B JASPAR yes 125900245
chr10 21641993 21642003 EMX1 JASPAR yes 125900246
chr10 21641993 21642003 EMX2 JASPAR yes 125900247
chr10 21641993 21642003 ESX1 JASPAR yes 125900248
chr10 21641993 21642003 EVX1 JASPAR yes 125900249
chr10 21641993 21642003 EVX2 JASPAR yes 125900250
chr10 21641993 21642003 GBX2 JASPAR yes 125900251
chr10 21641993 21642003 HESX1 JASPAR yes 125900252
chr10 21641993 21642003 HOXA2 JASPAR yes 125900253
chr10 21641993 21642003 HOXB2 JASPAR yes 125900254
chr10 21641993 21642003 HOXB3 JASPAR yes 125900255
chr10 21641993 21642003 LHX2 JASPAR yes 125900256
chr10 21641993 21642003 LHX6 JASPAR yes 125900257
chr10 21641993 21642003 MEOX1 JASPAR yes 125900258
chr10 21641993 21642003 MEOX2 JASPAR yes 125900259
chr10 21641993 21642003 POU6F1 JASPAR yes 125900260
chr10 21641993 21642003 RAX JASPAR yes 125900261
chr10 21641994 21642002 LBX1 JASPAR yes 125900262
chr10 21641994 21642002 PDX1 JASPAR yes 125900263
chr10 21641994 21642002 VAX1 JASPAR yes 125900264
chr10 21641994 21642002 VAX2 JASPAR yes 125900265
chr10 21641994 21642002 VSX1 JASPAR yes 125900266
chr10 21641994 21642002 VSX2 JASPAR yes 125900267
chr10 21641994 21642004 POU6F2 JASPAR yes 125900268
Genes associated with rs144020546[chr10:21641997], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More