EnhancerDB
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  3. rs144100296[chr17:43252073]
Enhancers that have rs144100296[chr17:43252073]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 43246305 43256255 enh4426
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Lung Muscle (A673)
Transcript factors that have rs144100296[chr17:43252073]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 43252068 43252078 ID4 JASPAR yes 54433261
chr17 43252068 43252078 TCF3 JASPAR yes 54433262
chr17 43252068 43252078 TCF4 JASPAR yes 54433263
chr17 43252069 43252078 SNAI2 JASPAR yes 54433264
chr17 43252070 43252075 USF2 TRANSFAC yes 54433265
Genes associated with rs144100296[chr17:43252073], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More