EnhancerDB
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  3. rs144240060[chr12:125246179]
Enhancers that have rs144240060[chr12:125246179]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144240060[chr12:125246179]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125245882 125247075 AR GTRD no Prostate (PC-3) 21582885
chr12 125245882 125247075 AR GTRD no Prostate (PC-3) 108069860
chr12 125245974 125246334 ZNF143 GTRD no Epithelial (MCF-7) 21582886
chr12 125245974 125246334 ZNF143 GTRD no Epithelial (MCF-7) 108069861
chr12 125246013 125246666 ZNF143 GTRD no Epithelial (MCF-7) 21582887
chr12 125246013 125246666 ZNF143 GTRD no Epithelial (MCF-7) 108069862
chr12 125246105 125246587 ZNF143 GTRD no Epithelial (MCF-7) 21582888
chr12 125246105 125246587 ZNF143 GTRD no Epithelial (MCF-7) 108069863
chr12 125246172 125246184 PROX1 JASPAR yes 124418987
Genes associated with rs144240060[chr12:125246179], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More