EnhancerDB
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  3. rs144337944[chr1:54842590]
Enhancers that have rs144337944[chr1:54842590]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54820685 54854719 enh11867
Bone Marrow (K562) Liver Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Blood (GM12878) Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
chr1 54842500 54842749 vista1653
VISTA
Transcript factors that have rs144337944[chr1:54842590]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54841805 54842594 ZNF274 GTRD no Liver (HepG2) 107804902
chr1 54841992 54842676 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804903
chr1 54842038 54842654 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107804905
chr1 54842070 54842666 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804907
chr1 54842070 54842700 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804908
chr1 54842099 54842759 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804909
chr1 54842261 54842631 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804916
chr1 54842282 54842612 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804917
chr1 54842295 54842605 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804918
chr1 54842342 54842618 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804919
chr1 54842380 54842600 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804921
chr1 54842413 54842809 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804922
chr1 54842428 54842708 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804923
chr1 54842431 54842751 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107804924
chr1 54842431 54843175 JUND UCSC Txn Factor no Conserved 107804925
chr1 54842439 54842709 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804927
chr1 54842453 54842737 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804928
chr1 54842459 54842719 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107804929
chr1 54842459 54842743 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804930
chr1 54842462 54842706 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804931
chr1 54842467 54843097 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107804932
chr1 54842468 54842744 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107804933
chr1 54842490 54842899 ZNF274 GTRD no Bone Marrow (K562) 107804934
chr1 54842499 54843003 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804935
chr1 54842516 54842666 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804936
chr1 54842523 54842645 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804937
chr1 54842584 54842598 JUN JASPAR yes 28979837
chr1 54842584 54842598 JUN JASPAR yes 118292612
chr1 54842584 54843040 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107804938
chr1 54842586 54842597 BATF JASPAR yes 28979838
chr1 54842586 54842597 BATF JASPAR yes 118292613
chr1 54842587 54842598 FOSL2 JASPAR yes 28979839
chr1 54842587 54842598 JUNB JASPAR yes 28979840
chr1 54842587 54842598 FOSL2 JASPAR yes 118292614
chr1 54842587 54842598 JUNB JASPAR yes 118292615
chr1 54842588 54842599 FOS JASPAR yes 28979841
chr1 54842588 54842599 FOSL1 JASPAR yes 28979842
chr1 54842588 54842599 JUND JASPAR yes 28979843
chr1 54842588 54842599 NFE2 JASPAR yes 28979844
chr1 54842588 54842599 FOS JASPAR yes 118292616
chr1 54842588 54842599 FOSL1 JASPAR yes 118292617
chr1 54842588 54842599 JUND JASPAR yes 118292618
chr1 54842588 54842599 NFE2 JASPAR yes 118292619
chr1 54842589 54842598 JDP2 JASPAR yes 28979845
chr1 54842589 54842598 JDP2 JASPAR yes 118292620
chr1 54842589 54842600 FOSL2 JASPAR yes 28979846
chr1 54842589 54842600 JUNB JASPAR yes 28979847
chr1 54842589 54842600 FOSL2 JASPAR yes 118292621
chr1 54842589 54842600 JUNB JASPAR yes 118292622
chr1 54842589 54842603 JUN JASPAR yes 28979848
chr1 54842589 54842603 JUN JASPAR yes 118292623
Genes associated with rs144337944[chr1:54842590], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More