EnhancerDB
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  3. rs144392439[chr1:226846104]
Enhancers that have rs144392439[chr1:226846104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144392439[chr1:226846104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226846092 226846106 PLAG1 JASPAR yes 35828746
chr1 226846093 226846114 IRF1 JASPAR yes 35828747
chr1 226846095 226846110 IRF9 JASPAR yes 35828748
chr1 226846096 226846110 IRF7 JASPAR yes 35828749
chr1 226846096 226846110 IRF8 JASPAR yes 35828750
chr1 226846097 226846111 STAT1 JASPAR yes 35828751
chr1 226846097 226846112 STAT2 JASPAR yes 35828752
chr1 226846097 226846115 IRF2 JASPAR yes 35828753
chr1 226846098 226846110 IRF1 JASPAR yes 35828754
Genes associated with rs144392439[chr1:226846104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More