EnhancerDB
  1. Home
  2. SNP
  3. rs144396596[chr1:16206670]
Enhancers that have rs144396596[chr1:16206670]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16203705 16215635 enh81
Bone Marrow (K562) Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs144396596[chr1:16206670]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 21325255
chr1 16204564 16209335 TCF7L2 GTRD no Colon (HCT116) 107802203
chr1 16206668 16206673 TFAP2A TRANSFAC yes 27009819
chr1 16206668 16206674 MZF1 JASPAR yes 27009820
chr1 16206670 16206675 ETS2 TRANSFAC yes 27009821
Genes associated with rs144396596[chr1:16206670], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More