EnhancerDB
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  3. rs144420143[chr1:173379084]
Enhancers that have rs144420143[chr1:173379084]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs144420143[chr1:173379084]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173378686 173379130 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21351275
chr1 173378734 173379090 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21351277
chr1 173379063 173379360 SOX2 GTRD no Neural Stem Cells (H9) 21351279
Genes associated with rs144420143[chr1:173379084], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More