EnhancerDB
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  3. rs144553613[chr1:27778519]
Enhancers that have rs144553613[chr1:27778519]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144553613[chr1:27778519]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27778515 27778524 ZEB1 JASPAR yes 27696045
chr1 27778516 27778526 FIGLA JASPAR yes 27696046
chr1 27778517 27778534 RARA JASPAR yes 27696047
chr1 27778517 27778534 RXRA JASPAR yes 27696048
chr1 27778518 27778523 USF2 TRANSFAC yes 27696049
chr1 27778519 27778525 PTF TRANSFAC yes 27696050
Genes associated with rs144553613[chr1:27778519], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More