EnhancerDB
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  3. rs144569644[chr17:55988391]
Enhancers that have rs144569644[chr17:55988391]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144569644[chr17:55988391]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55988387 55988406 REST JASPAR yes 54998092
chr17 55988388 55988403 NR2C2 JASPAR yes 54998093
chr17 55988389 55988395 SP1 TRANSFAC yes 54998094
Genes associated with rs144569644[chr17:55988391], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More