EnhancerDB
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  3. rs144779380[chr12:125218716]
Enhancers that have rs144779380[chr12:125218716]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs144779380[chr12:125218716]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125218503 125218863 SOX2 GTRD no Neural Stem Cells (H9) 21582433
chr12 125218659 125219383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582434
chr12 125218659 125219383 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069666
chr12 125218679 125219303 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582435
chr12 125218679 125219303 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069667
Genes associated with rs144779380[chr12:125218716], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More