EnhancerDB
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  3. rs144872448[chr1:234622471]
Enhancers that have rs144872448[chr1:234622471]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234620765 234647895 enh990
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs144872448[chr1:234622471]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234621224 234622475 ZBTB33 GTRD no Brain (SK-N-SH) 21393114
chr1 234621406 234622513 ZBTB33 GTRD no Brain (SK-N-SH) 21393116
chr1 234621496 234622517 ZBTB33 GTRD no Brain (SK-N-SH) 21393118
chr1 234621499 234622573 ZBTB33 GTRD no Brain (SK-N-SH) 21393119
chr1 234621553 234622518 ZBTB33 GTRD no Brain (SK-N-SH) 21393124
chr1 234622462 234622477 TFAP2A JASPAR yes 36277517
chr1 234622464 234622479 TFAP2A JASPAR yes 36277518
chr1 234622464 234622479 TFAP2C JASPAR yes 36277519
chr1 234622465 234622476 TFAP2A JASPAR yes 36277520
chr1 234622465 234622476 TFAP2B JASPAR yes 36277521
chr1 234622465 234622476 TFAP2C JASPAR yes 36277522
chr1 234622470 234622488 RARA JASPAR yes 36277523
Genes associated with rs144872448[chr1:234622471], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More