EnhancerDB
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  3. rs145085169[chr11:65206554]
Enhancers that have rs145085169[chr11:65206554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 65180298 65217415 enh1825
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs145085169[chr11:65206554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 65205886 65206764 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21492829
chr11 65206187 65206709 ZNF274 GTRD no Bone Marrow (K562) 21492830
chr11 65206226 65207060 TCF7L2 GTRD no Colon (HCT116) 21492831
chr11 65206239 65207021 TCF7L2 GTRD no Colon (HCT116) 21492832
chr11 65206291 65206946 TCF7L2 GTRD no Colon (HCT116) 21492833
chr11 65206294 65206570 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21492834
chr11 65206294 65207072 TCF7L2 GTRD no Colon (HCT116) 21492835
chr11 65206458 65206652 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21492836
chr11 65206541 65206555 POU1F1 JASPAR yes 39316818
chr11 65206546 65206556 GSX1 JASPAR yes 39316819
chr11 65206546 65206556 GSX2 JASPAR yes 39316820
chr11 65206546 65206556 HOXB3 JASPAR yes 39316821
chr11 65206551 65206562 TBX20 JASPAR yes 39316822
Genes associated with rs145085169[chr11:65206554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More