EnhancerDB
  1. Home
  2. SNP
  3. rs145126533[chr17:55562289]
Enhancers that have rs145126533[chr17:55562289]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs145126533[chr17:55562289]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55562276 55562291 JUND JASPAR yes 54960240
chr17 55562277 55562290 EOMES JASPAR yes 54960241
chr17 55562279 55562299 TBX19 JASPAR yes 54960242
chr17 55562281 55562297 T JASPAR yes 54960243
chr17 55562283 55562300 RARA JASPAR yes 54960244
chr17 55562283 55562300 RXRA JASPAR yes 54960245
Genes associated with rs145126533[chr17:55562289], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More