EnhancerDB
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  3. rs145339717[chr1:44009733]
Enhancers that have rs145339717[chr1:44009733]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43989845 44027077 enh11814
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs145339717[chr1:44009733]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 44009528 44011639 TCF7L2 GTRD no Colon (HCT116) 107803030
chr1 44009725 44009735 ID4 JASPAR yes 28504187
chr1 44009725 44009735 TCF4 JASPAR yes 28504188
chr1 44009731 44009743 TFAP2A JASPAR yes 28504189
chr1 44009731 44009743 TFAP2B JASPAR yes 28504190
chr1 44009731 44009743 TFAP2C JASPAR yes 28504191
chr1 44009731 44009746 TFAP2A JASPAR yes 28504192
chr1 44009732 44009741 TFAP2A TRANSFAC yes 28504193
Genes associated with rs145339717[chr1:44009733], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More