EnhancerDB
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  3. rs145556129[chr16:4339347]
Enhancers that have rs145556129[chr16:4339347]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs145556129[chr16:4339347]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4336163 4339441 TCF7L2 GTRD no Colon (HCT116) 21686305
chr16 4336332 4339430 ZNF143 GTRD no Epithelial (MCF-7) 21686308
chr16 4336343 4339415 TCF7L2 GTRD no Colon (HCT116) 21686309
chr16 4336589 4339442 TCF7L2 GTRD no Colon (HCT116) 21686312
chr16 4337733 4339419 TCF7L2 GTRD no Colon (HCT116) 21686325
chr16 4338609 4339433 ZNF143 GTRD no Epithelial (MCF-7) 21686361
chr16 4338613 4339426 ZNF143 GTRD no Epithelial (MCF-7) 21686362
chr16 4338616 4339634 ZNF143 GTRD no Epithelial (MCF-7) 21686363
chr16 4338679 4339570 ZNF143 GTRD no Epithelial (MCF-7) 21686364
chr16 4338734 4339469 ZNF143 GTRD no Epithelial (MCF-7) 21686366
chr16 4338735 4339416 ZNF143 GTRD no Epithelial (MCF-7) 21686367
chr16 4338762 4339386 ZNF143 GTRD no Epithelial (MCF-7) 21686368
chr16 4338827 4339386 ZNF143 GTRD no Epithelial (MCF-7) 21686369
chr16 4339040 4339376 ZNF274 GTRD no Liver (HepG2) 21686372
chr16 4339247 4339450 ZNF143 GTRD no Epithelial (MCF-7) 21686373
Genes associated with rs145556129[chr16:4339347], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More