EnhancerDB
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  3. rs145559465[chr10:29879216]
Enhancers that have rs145559465[chr10:29879216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr10 29869734 29882850 enh13093
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr10 29879091 29879350 vista6943
VISTA
Transcript factors that have rs145559465[chr10:29879216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr10 29879210 29879220 ALX3 JASPAR yes 21067243
chr10 29879210 29879220 EN2 JASPAR yes 21067244
chr10 29879210 29879220 ESX1 JASPAR yes 21067245
chr10 29879210 29879220 GBX2 JASPAR yes 21067246
chr10 29879210 29879220 GSX1 JASPAR yes 21067247
chr10 29879210 29879220 GSX2 JASPAR yes 21067248
chr10 29879210 29879220 LBX2 JASPAR yes 21067249
chr10 29879210 29879220 LHX2 JASPAR yes 21067250
chr10 29879210 29879220 ALX3 JASPAR yes 126328775
chr10 29879210 29879220 EN2 JASPAR yes 126328776
chr10 29879210 29879220 ESX1 JASPAR yes 126328777
chr10 29879210 29879220 GBX2 JASPAR yes 126328778
chr10 29879210 29879220 GSX1 JASPAR yes 126328779
chr10 29879210 29879220 GSX2 JASPAR yes 126328780
chr10 29879210 29879220 LBX2 JASPAR yes 126328781
chr10 29879210 29879220 LHX2 JASPAR yes 126328782
chr10 29879211 29879219 BARX1 JASPAR yes 21067254
chr10 29879211 29879219 BSX JASPAR yes 21067255
chr10 29879211 29879219 DLX6 JASPAR yes 21067256
chr10 29879211 29879219 ISX JASPAR yes 21067257
chr10 29879211 29879219 LBX1 JASPAR yes 21067258
chr10 29879211 29879219 LHX9 JASPAR yes 21067259
chr10 29879211 29879219 MSX1 JASPAR yes 21067260
chr10 29879211 29879219 MSX2 JASPAR yes 21067261
chr10 29879211 29879219 NKX6-2 JASPAR yes 21067262
chr10 29879211 29879219 PRRX1 JASPAR yes 21067263
chr10 29879211 29879219 RAX2 JASPAR yes 21067264
chr10 29879211 29879219 SHOX JASPAR yes 21067265
chr10 29879211 29879219 UNCX JASPAR yes 21067266
chr10 29879211 29879219 BARX1 JASPAR yes 126328786
chr10 29879211 29879219 BSX JASPAR yes 126328787
chr10 29879211 29879219 DLX6 JASPAR yes 126328788
chr10 29879211 29879219 ISX JASPAR yes 126328789
chr10 29879211 29879219 LBX1 JASPAR yes 126328790
chr10 29879211 29879219 LHX9 JASPAR yes 126328791
chr10 29879211 29879219 MSX1 JASPAR yes 126328792
chr10 29879211 29879219 MSX2 JASPAR yes 126328793
chr10 29879211 29879219 NKX6-2 JASPAR yes 126328794
chr10 29879211 29879219 PRRX1 JASPAR yes 126328795
chr10 29879211 29879219 RAX2 JASPAR yes 126328796
chr10 29879211 29879219 SHOX JASPAR yes 126328797
chr10 29879211 29879219 UNCX JASPAR yes 126328798
chr10 29879216 29879223 NKX3-1 JASPAR yes 21067267
chr10 29879216 29879223 NKX3-1 JASPAR yes 126328799
Genes associated with rs145559465[chr10:29879216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More