EnhancerDB
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  3. rs145838228[chr5:172284688]
Enhancers that have rs145838228[chr5:172284688]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172258805 172341224 enh22817
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs145838228[chr5:172284688]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172284684 172284690 SP1 TRANSFAC yes 67835494
chr5 172284684 172284694 SP1 JASPAR yes 67835495
chr5 172284688 172284699 EBF1 JASPAR yes 67835496
Genes associated with rs145838228[chr5:172284688], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More