EnhancerDB
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  3. rs146061790[chr1:235125011]
Enhancers that have rs146061790[chr1:235125011]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146061790[chr1:235125011]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235124808 235126532 ZNF274 GTRD no Bone Marrow (K562) 21402698
chr1 235124808 235126532 ZNF274 GTRD no Bone Marrow (K562) 107885432
chr1 235124858 235125194 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402699
chr1 235124867 235125157 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21402700
chr1 235124881 235125117 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21402701
chr1 235125005 235125020 HNF4G JASPAR yes 36339061
chr1 235125006 235125020 NR2F1 JASPAR yes 36339062
chr1 235125006 235125021 HNF4A JASPAR yes 36339063
chr1 235125011 235125024 NR2F1 JASPAR yes 36339064
Genes associated with rs146061790[chr1:235125011], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More