EnhancerDB
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  3. rs146078305[chr17:25679968]
Enhancers that have rs146078305[chr17:25679968]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146078305[chr17:25679968]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245255
chr17 25679791 25681354 POLR2A UCSC Txn Factor no Conserved 108245256
chr17 25679883 25680293 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108245257
chr17 25679888 25680278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747663
chr17 25679888 25680278 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108245258
chr17 25679945 25680149 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21747664
chr17 25679957 25679969 NHLH1 JASPAR yes 53623460
Genes associated with rs146078305[chr17:25679968], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More