EnhancerDB
  1. Home
  2. SNP
  3. rs146087988[chr1:235093542]
Enhancers that have rs146087988[chr1:235093542]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146087988[chr1:235093542]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235092848 235094748 ZNF274 GTRD no Cervix (HeLa-S3) 21401232
chr1 235092895 235094711 ZNF274 GTRD no Bone Marrow (K562) 21401234
chr1 235092925 235093649 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401236
chr1 235092936 235093729 TCF7L2 GTRD no Colon (HCT116) 21401238
chr1 235092943 235094459 ZNF274 GTRD no Bone Marrow (K562) 21401240
chr1 235092944 235094520 ZNF274 GTRD no Bone Marrow (K562) 21401241
chr1 235092955 235094392 ZNF143 GTRD no Epithelial (MCF-7) 21401243
chr1 235092959 235094300 ZNF143 GTRD no Epithelial (MCF-7) 21401244
chr1 235092959 235094406 ZNF274 GTRD no Bone Marrow (K562) 21401245
chr1 235092962 235094433 ZNF274 GTRD no Blood (GM12878) 21401246
chr1 235092962 235094434 ZNF143 GTRD no Epithelial (MCF-7) 21401247
chr1 235092967 235094334 ZNF143 GTRD no Epithelial (MCF-7) 21401248
chr1 235092970 235094414 ZNF274 GTRD no Liver (HepG2) 21401249
chr1 235092972 235094573 ZNF143 GTRD no Epithelial (MCF-7) 21401250
chr1 235092973 235094822 ZNF274 GTRD no Bone Marrow (K562) 21401251
chr1 235092975 235094613 ZNF143 GTRD no Epithelial (MCF-7) 21401252
chr1 235092981 235093904 ZNF143 GTRD no Epithelial (MCF-7) 21401253
chr1 235092988 235094467 ZNF143 GTRD no Epithelial (MCF-7) 21401254
chr1 235092990 235094419 ZNF274 GTRD no Bone Marrow (K562) 21401255
chr1 235092991 235094753 ZNF274 GTRD no Cervix (HeLa-S3) 21401256
chr1 235092995 235094663 ZNF143 GTRD no Epithelial (MCF-7) 21401257
chr1 235092999 235093807 TCF7L2 GTRD no Colon (HCT116) 21401258
chr1 235093013 235094662 ZNF274 GTRD no Liver (HepG2) 21401259
chr1 235093025 235094641 ZNF274 GTRD no Cervix (HeLa-S3) 21401262
chr1 235093027 235093591 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401263
chr1 235093068 235093584 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21401272
chr1 235093078 235094320 ZNF274 GTRD no Bone Marrow (K562) 21401273
chr1 235093079 235094371 ZNF274 GTRD no Bone Marrow (K562) 21401274
chr1 235093086 235093551 TCF7L2 GTRD no Colon (HCT116) 21401277
chr1 235093088 235093584 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401278
chr1 235093088 235094487 ZNF274 GTRD no Bone Marrow (K562) 21401279
chr1 235093092 235093864 TCF7L2 GTRD no Colon (HCT116) 21401281
chr1 235093093 235094545 ZNF274 GTRD no Blood (GM12878) 21401282
chr1 235093102 235093558 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401285
chr1 235093116 235093740 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401288
chr1 235093133 235093562 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401292
chr1 235093137 235094099 ZNF143 GTRD no Epithelial (MCF-7) 21401298
chr1 235093139 235093579 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401299
chr1 235093158 235094388 ZNF274 GTRD no Bone Marrow (K562) 21401311
chr1 235093161 235093551 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401312
chr1 235093162 235094295 ZNF274 GTRD no Bone Marrow (K562) 21401313
chr1 235093172 235093542 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401323
chr1 235093179 235093549 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401328
chr1 235093183 235093543 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401330
chr1 235093188 235093607 ZNF143 GTRD no Epithelial (MCF-7) 21401335
chr1 235093190 235094512 ZNF274 GTRD no Blood (GM12878) 21401338
chr1 235093191 235094350 ZNF274 GTRD no Liver (HepG2) 21401339
chr1 235093196 235093620 ZNF274 GTRD no Bone Marrow (K562) 21401344
chr1 235093196 235094440 ZNF274 GTRD no Blood (GM12878) 21401345
chr1 235093199 235094397 ZNF143 GTRD no Epithelial (MCF-7) 21401347
chr1 235093205 235093609 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401352
chr1 235093205 235094566 ZNF274 GTRD no Blood (GM12878) 21401353
chr1 235093208 235094330 ZNF274 GTRD no Bone Marrow (K562) 21401355
chr1 235093209 235094454 ZNF274 GTRD no Cervix (HeLa-S3) 21401356
chr1 235093212 235094407 ZNF143 GTRD no Epithelial (MCF-7) 21401357
chr1 235093213 235094274 ZNF274 GTRD no Bone Marrow (K562) 21401358
chr1 235093213 235094440 ZNF274 GTRD no Liver (HepG2) 21401359
chr1 235093217 235094828 ZNF143 GTRD no Epithelial (MCF-7) 21401361
chr1 235093223 235093685 ZNF274 GTRD no Bone Marrow (K562) 21401363
chr1 235093224 235094501 ZNF274 GTRD no Blood (GM12878) 21401366
chr1 235093231 235094410 ZNF274 GTRD no Blood (GM12878) 21401369
chr1 235093235 235094284 ZNF274 GTRD no Liver (HepG2) 21401374
chr1 235093236 235094430 ZNF274 GTRD no Bone Marrow (K562) 21401375
chr1 235093239 235093697 ZNF274 GTRD no Bone Marrow (K562) 21401377
chr1 235093242 235094232 ZNF274 GTRD no Cervix (HeLa-S3) 21401378
chr1 235093253 235094385 ZNF274 GTRD no Blood (GM12878) 21401380
chr1 235093264 235094308 ZNF274 GTRD no Liver (HepG2) 21401383
chr1 235093266 235094247 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401384
chr1 235093266 235094254 ZNF274 GTRD no Bone Marrow (K562) 21401385
chr1 235093269 235094321 ZNF274 GTRD no Liver (HepG2) 21401386
chr1 235093272 235093584 ZNF143 GTRD no Epithelial (MCF-7) 21401387
chr1 235093276 235094339 ZNF274 GTRD no Liver (HepG2) 21401388
chr1 235093282 235093786 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21401390
chr1 235093291 235093619 ZNF274 GTRD no Bone Marrow (K562) 21401392
chr1 235093291 235093951 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21401393
chr1 235093293 235094327 ZNF274 GTRD no Bone Marrow (K562) 21401394
chr1 235093293 235094329 ZNF274 GTRD no Bone Marrow (K562) 21401395
chr1 235093293 235094422 ZNF274 GTRD no Bone Marrow (K562) 21401396
chr1 235093304 235094144 ZNF274 GTRD no Bone Marrow (K562) 21401399
chr1 235093318 235093680 ZNF274 GTRD no Liver (HepG2) 21401400
chr1 235093329 235094272 CTCF GTRD no Kidney 21401401
chr1 235093330 235094321 ZNF274 GTRD no Blood (GM12878) 21401402
chr1 235093331 235093993 SOX2 GTRD no Neural Stem Cells (H9) 21401403
chr1 235093338 235093596 ZNF274 GTRD no Liver (HepG2) 21401404
chr1 235093352 235093848 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21401405
chr1 235093364 235093761 CTCF GTRD no Lung 21401406
chr1 235093471 235093872 ZNF143 GTRD no Epithelial (MCF-7) 21401407
chr1 235093532 235093553 ZNF263 JASPAR yes 36334595
chr1 235093535 235093545 SP1 JASPAR yes 36334597
chr1 235093541 235093555 TCF7L2 JASPAR yes 36334598
Genes associated with rs146087988[chr1:235093542], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More