EnhancerDB
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  3. rs146251090[chr12:116958915]
Enhancers that have rs146251090[chr12:116958915]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 116953469 116985255 enh30011
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr12 116958826 116959052 vista15036
VISTA
Transcript factors that have rs146251090[chr12:116958915]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 116958182 116959091 ZNF143 GTRD no Epithelial (MCF-7) 21577179
chr12 116958182 116959091 ZNF143 GTRD no Epithelial (MCF-7) 108061732
chr12 116958206 116959013 ZNF143 GTRD no Epithelial (MCF-7) 21577180
chr12 116958206 116959013 ZNF143 GTRD no Epithelial (MCF-7) 108061733
chr12 116958732 116959108 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21577184
chr12 116958732 116959108 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108061740
chr12 116958910 116958931 REST JASPAR yes 82483973
chr12 116958910 116958931 REST JASPAR yes 124005808
chr12 116958911 116958930 REST JASPAR yes 82483974
chr12 116958911 116958930 REST JASPAR yes 124005809
chr12 116958912 116958918 NFE2 TRANSFAC yes 82483975
chr12 116958912 116958918 NFE2 TRANSFAC yes 124005810
Genes associated with rs146251090[chr12:116958915], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More