EnhancerDB
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  3. rs146275279[chr1:27761835]
Enhancers that have rs146275279[chr1:27761835]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146275279[chr1:27761835]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27761833 27761841 TBX15 JASPAR yes 27693381
chr1 27761833 27761841 TBX4 JASPAR yes 27693382
chr1 27761833 27761842 ZEB1 JASPAR yes 27693383
chr1 27761834 27761844 ID4 JASPAR yes 27693384
chr1 27761834 27761844 TCF3 JASPAR yes 27693385
chr1 27761834 27761844 TCF4 JASPAR yes 27693386
chr1 27761835 27761844 SNAI2 JASPAR yes 27693387
Genes associated with rs146275279[chr1:27761835], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More