EnhancerDB
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  3. rs146287996[chr1:154388790]
Enhancers that have rs146287996[chr1:154388790]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 154376585 154406743 enh12276
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146287996[chr1:154388790]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 154388779 154388800 IRF1 JASPAR yes 32289922
chr1 154388783 154388798 FOXP1 JASPAR yes 32289923
chr1 154388784 154388799 FOXP1 JASPAR yes 32289924
chr1 154388785 154388800 FOXP1 JASPAR yes 32289925
chr1 154388786 154388801 FOXP1 JASPAR yes 32289926
chr1 154388787 154388802 FOXP1 JASPAR yes 32289927
chr1 154388788 154388803 FOXP1 JASPAR yes 32289928
chr1 154388789 154388804 FOXP1 JASPAR yes 32289929
chr1 154388790 154388805 FOXP1 JASPAR yes 32289930
Genes associated with rs146287996[chr1:154388790], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More