EnhancerDB
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  3. rs146392229[chr17:65470299]
Enhancers that have rs146392229[chr17:65470299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 65460484 65480775 enh32309
Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Kidney Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Spleen Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs146392229[chr17:65470299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 65470224 65470541 TEF1 GTRD no Bone (Osteoblast) 21782233
chr17 65470224 65470541 TEF1 GTRD no Bone (Osteoblast) 108285869
chr17 65470291 65470301 SP1 JASPAR yes 55508753
chr17 65470294 65470299 SP1 TRANSFAC yes 55508754
Genes associated with rs146392229[chr17:65470299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More