EnhancerDB
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  3. rs146398894[chr1:41864326]
Enhancers that have rs146398894[chr1:41864326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146398894[chr1:41864326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41864322 41864338 POU4F3 JASPAR yes 28385174
chr1 41864324 41864338 POU4F1 JASPAR yes 28385175
chr1 41864324 41864339 HNF1A JASPAR yes 28385176
chr1 41864325 41864335 GSX1 JASPAR yes 28385177
chr1 41864325 41864335 GSX2 JASPAR yes 28385178
chr1 41864325 41864335 LHX2 JASPAR yes 28385179
chr1 41864325 41864335 LHX6 JASPAR yes 28385180
chr1 41864325 41864335 MNX1 JASPAR yes 28385181
chr1 41864325 41864335 NOTO JASPAR yes 28385182
chr1 41864325 41864335 POU6F1 JASPAR yes 28385183
chr1 41864325 41864335 RAX JASPAR yes 28385184
chr1 41864325 41864338 HNF1B JASPAR yes 28385185
chr1 41864325 41864339 POU4F1 JASPAR yes 28385186
chr1 41864325 41864341 POU4F3 JASPAR yes 28385187
chr1 41864326 41864334 ISX JASPAR yes 28385188
chr1 41864326 41864334 LMX1A JASPAR yes 28385189
chr1 41864326 41864334 LMX1B JASPAR yes 28385190
chr1 41864326 41864334 NKX6-1 JASPAR yes 28385191
chr1 41864326 41864334 NKX6-2 JASPAR yes 28385192
chr1 41864326 41864334 PRRX1 JASPAR yes 28385193
chr1 41864326 41864334 RAX2 JASPAR yes 28385194
chr1 41864326 41864334 SHOX JASPAR yes 28385195
chr1 41864326 41864334 UNCX JASPAR yes 28385196
chr1 41864326 41864334 VAX1 JASPAR yes 28385197
chr1 41864326 41864342 POU4F2 JASPAR yes 28385198
chr1 41864326 41864342 POU4F3 JASPAR yes 28385199
Genes associated with rs146398894[chr1:41864326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More