EnhancerDB
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  3. rs146405497[chr12:52510621]
Enhancers that have rs146405497[chr12:52510621]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52508085 52522855 enh2356
Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Spleen Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs146405497[chr12:52510621]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52510332 52510652 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546111
chr12 52510334 52510718 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546112
chr12 52510354 52510624 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546113
chr12 52510367 52510727 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546114
chr12 52510400 52510636 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546115
chr12 52510433 52510677 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21546116
chr12 52510433 52510703 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546117
chr12 52510471 52510661 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21546119
chr12 52510614 52510629 FOXA1 JASPAR yes 120918163
chr12 52510616 52510628 FOXC2 JASPAR yes 120918164
chr12 52510617 52510628 FOXB1 JASPAR yes 120918165
chr12 52510617 52510628 FOXC1 JASPAR yes 120918166
Genes associated with rs146405497[chr12:52510621], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More