EnhancerDB
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  3. rs146454456[chr16:4334642]
Enhancers that have rs146454456[chr16:4334642]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146454456[chr16:4334642]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4334425 4335774 TCF7L2 GTRD no Colon (HCT116) 21686288
chr16 4334573 4335501 ZNF143 GTRD no Epithelial (MCF-7) 21686289
chr16 4334599 4335731 ZNF143 GTRD no Epithelial (MCF-7) 21686290
chr16 4334622 4335802 TCF7L2 GTRD no Colon (HCT116) 21686291
chr16 4334630 4335764 ZNF143 GTRD no Epithelial (MCF-7) 21686292
chr16 4334637 4335351 ZNF143 GTRD no Epithelial (MCF-7) 21686293
chr16 4334641 4334651 ID4 JASPAR yes 9266178
chr16 4334641 4334651 TCF3 JASPAR yes 9266179
chr16 4334641 4334651 TCF4 JASPAR yes 9266180
chr16 4334642 4334651 SNAI2 JASPAR yes 9266181
Genes associated with rs146454456[chr16:4334642], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More