EnhancerDB
  1. Home
  2. SNP
  3. rs146467794[chr16:4336153]
Enhancers that have rs146467794[chr16:4336153]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146467794[chr16:4336153]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4335895 4336299 ZNF143 GTRD no Epithelial (MCF-7) 21686300
chr16 4335901 4337072 ZNF143 GTRD no Epithelial (MCF-7) 21686301
chr16 4335916 4336236 ZNF143 GTRD no Epithelial (MCF-7) 21686302
chr16 4335934 4336333 ZNF143 GTRD no Epithelial (MCF-7) 21686303
chr16 4335970 4340905 TCF7L2 GTRD no Colon (HCT116) 21686304
chr16 4336133 4336154 IRF1 JASPAR yes 9266494
chr16 4336149 4336161 FOXC2 JASPAR yes 9266495
Genes associated with rs146467794[chr16:4336153], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More