EnhancerDB
  1. Home
  2. SNP
  3. rs146468354[chr17:28052583]
Enhancers that have rs146468354[chr17:28052583]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs146468354[chr17:28052583]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28051687 28054658 ZNF274 GTRD no Bone Marrow (K562) 21749607
chr17 28051687 28054658 ZNF274 GTRD no Bone Marrow (K562) 108248081
chr17 28052504 28054327 ZNF274 GTRD no Blood (GM12878) 21749608
chr17 28052504 28054327 ZNF274 GTRD no Blood (GM12878) 108248082
chr17 28052580 28052591 CDX2 JASPAR yes 53754011
chr17 28052581 28052592 HOXA10 JASPAR yes 53754012
chr17 28052581 28052592 HOXD12 JASPAR yes 53754013
chr17 28052582 28052591 CDX1 JASPAR yes 53754014
chr17 28052582 28052592 HOXA13 JASPAR yes 53754015
chr17 28052582 28052592 HOXB13 JASPAR yes 53754016
chr17 28052582 28052592 HOXD13 JASPAR yes 53754017
Genes associated with rs146468354[chr17:28052583], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More