EnhancerDB
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  3. rs146649938[chr1:203258563]
Enhancers that have rs146649938[chr1:203258563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 203258547 203259334 vista4626
VISTA
Transcript factors that have rs146649938[chr1:203258563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367893
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858336
chr1 203258229 203259832 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858337
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858338
chr1 203258229 203260240 POLR2A UCSC Txn Factor no Conserved 107858339
chr1 203258525 203258986 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367894
chr1 203258525 203258986 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858340
chr1 203258525 203259002 EBF1 UCSC Txn Factor no Conserved 107858341
chr1 203258534 203259050 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367895
chr1 203258534 203259050 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858342
chr1 203258555 203259145 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367896
chr1 203258555 203259145 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858343
chr1 203258558 203258922 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21367897
chr1 203258558 203258922 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107858344
chr1 203258563 203258572 HIC2 JASPAR yes 34614207
chr1 203258563 203258572 HIC2 JASPAR yes 118435121
Genes associated with rs146649938[chr1:203258563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More