EnhancerDB
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  3. rs146668979[chr2:238596538]
Enhancers that have rs146668979[chr2:238596538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238592145 238619475 enh19401
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
chr2 238596328 238596696 vista35428
VISTA
Transcript factors that have rs146668979[chr2:238596538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238596354 238596645 RUNX3 UCSC Txn Factor no Conserved 108435950
chr2 238596412 238596699 CEBPB UCSC Txn Factor no Conserved 108435951
chr2 238596523 238596538 ZIC3 JASPAR yes 22242589
chr2 238596523 238596538 ZIC4 JASPAR yes 22242590
chr2 238596523 238596538 ZIC3 JASPAR yes 82132424
chr2 238596523 238596538 ZIC4 JASPAR yes 82132425
chr2 238596524 238596538 ZIC1 JASPAR yes 22242591
chr2 238596524 238596538 ZIC1 JASPAR yes 82132426
Genes associated with rs146668979[chr2:238596538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More