EnhancerDB
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  3. rs146678259[chr17:42175378]
Enhancers that have rs146678259[chr17:42175378]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 42170662 42193575 enh17179
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146678259[chr17:42175378]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 42175362 42175381 RFX2 JASPAR yes 54386753
chr17 42175370 42175384 SPI1 JASPAR yes 54386755
chr17 42175370 42175384 SPIC JASPAR yes 54386756
chr17 42175371 42175384 ELF1 JASPAR yes 54386757
chr17 42175372 42175384 EHF JASPAR yes 54386758
chr17 42175372 42175384 ELF1 JASPAR yes 54386759
chr17 42175372 42175384 ELF4 JASPAR yes 54386760
chr17 42175373 42175384 ELF5 JASPAR yes 54386761
chr17 42175373 42175384 ETV2 JASPAR yes 54386762
chr17 42175374 42175384 ERF JASPAR yes 54386763
chr17 42175374 42175384 ETS1 JASPAR yes 54386764
chr17 42175374 42175385 ELK4 JASPAR yes 54386765
chr17 42175374 42175385 FLI1 JASPAR yes 54386766
Genes associated with rs146678259[chr17:42175378], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More