EnhancerDB
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  3. rs1466871[chr1:16125637]
Enhancers that have rs1466871[chr1:16125637]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 16125579 16125747 vista497
VISTA
Transcript factors that have rs1466871[chr1:16125637]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16125156 16125857 TCF7L2 GTRD no Colon (HCT116) 107802198
chr1 16125632 16125649 RARA JASPAR yes 27002777
chr1 16125632 16125649 RARA JASPAR yes 118237309
chr1 16125633 16125637 ESR1 TRANSFAC yes 27002778
chr1 16125633 16125637 ESR1 TRANSFAC yes 118237310
chr1 16125634 16125649 TFAP2A JASPAR yes 27002779
chr1 16125634 16125649 TFAP2A JASPAR yes 118237311
chr1 16125636 16125651 TFAP2C JASPAR yes 27002780
chr1 16125636 16125651 TFAP2C JASPAR yes 118237312
Genes associated with rs1466871[chr1:16125637], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More