EnhancerDB
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  3. rs146837427[chr1:23458171]
Enhancers that have rs146837427[chr1:23458171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23435285 23459230 enh11606
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Ovary Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs146837427[chr1:23458171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23458158 23458173 HNF1A JASPAR yes 27416836
chr1 23458159 23458173 ONECUT3 JASPAR yes 27416837
chr1 23458165 23458180 FOXA1 JASPAR yes 27416839
chr1 23458166 23458178 FOXI1 JASPAR yes 27416840
chr1 23458166 23458181 FOXP1 JASPAR yes 27416841
chr1 23458167 23458179 FOXC2 JASPAR yes 27416842
chr1 23458167 23458181 ONECUT2 JASPAR yes 27416843
chr1 23458167 23458181 ONECUT3 JASPAR yes 27416844
chr1 23458168 23458179 FOXB1 JASPAR yes 27416845
chr1 23458168 23458179 FOXC1 JASPAR yes 27416846
chr1 23458169 23458173 YY1 TRANSFAC yes 27416847
Genes associated with rs146837427[chr1:23458171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More