EnhancerDB
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  3. rs146900027[chr1:235089417]
Enhancers that have rs146900027[chr1:235089417]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 235087405 235127975 enh996
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs146900027[chr1:235089417]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 21401110
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884472
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884473
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884474
chr1 235089229 235091514 ZNF274 GTRD no Bone Marrow (K562) 107884475
chr1 235089284 235089880 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401111
chr1 235089306 235089686 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401112
chr1 235089338 235089638 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401113
chr1 235089361 235089701 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21401114
chr1 235089363 235089747 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401115
chr1 235089400 235089928 ZNF274 GTRD no Blood (GM12878) 21401116
chr1 235089405 235089789 ZNF274 GTRD no Blood (GM12878) 21401117
chr1 235089416 235089926 ZNF274 GTRD no Blood (GM12878) 21401118
chr1 235089416 235090100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21401119
chr1 235089416 235090100 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107884476
Genes associated with rs146900027[chr1:235089417], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More